1. Biblio

Biblio

Found 39 results
Author Title Type [ Year(Desc)]
Filters: Keyword is Gene Expression Profiling  [Clear All Filters]
2000
R. L. Tanguay, Andreasen, E., Heideman, W., and Peterson, R. E., “Identification and expression of alternatively spliced aryl hydrocarbon nuclear translocator 2 (ARNT2) cDNAs from zebrafish with distinct functions.”, Biochim Biophys Acta, vol. 1494, no. 1-2, pp. 117-28, 2000.
2006
E. A. Andreasen, Mathew, L. K., and Tanguay, R. L., “Regenerative growth is impacted by TCDD: gene expression analysis reveals extracellular matrix modulation.”, Toxicol Sci, vol. 92, no. 1, pp. 254-69, 2006.
2007
Y. Li, Mezei, O., and Shay, N. F., “Human and murine hepatic sterol-12-alpha-hydroxylase and other xenobiotic metabolism mRNA are upregulated by soy isoflavones.”, J Nutr, vol. 137, no. 7, pp. 1705-12, 2007.
2008
M. Bionaz and Loor, J. J., “ACSL1, AGPAT6, FABP3, LPIN1, and SLC27A6 are the most abundant isoforms in bovine mammary tissue and their expression is affected by stage of lactation.”, J Nutr, vol. 138, no. 6, pp. 1019-24, 2008.
R. L. Tanguay and Reimers, M. J., “Analysis of ethanol developmental toxicity in zebrafish.”, Methods Mol Biol, vol. 447, pp. 63-74, 2008.
F. Tilton and Tanguay, R. L., “Exposure to sodium metam during zebrafish somitogenesis results in early transcriptional indicators of the ensuing neuronal and muscular dysfunction.”, Toxicol Sci, vol. 106, no. 1, pp. 103-12, 2008.
P. Piantoni, Bionaz, M., Graugnard, D. E., Daniels, K. M., Akers, M., and Loor, J. J., “Gene expression ratio stability evaluation in prepubertal bovine mammary tissue from calves fed different milk replacers reveals novel internal controls for quantitative polymerase chain reaction.”, J Nutr, vol. 138, no. 6, pp. 1158-64, 2008.
M. Bionaz and Loor, J. J., “Gene networks driving bovine milk fat synthesis during the lactation cycle.”, BMC Genomics, vol. 9, p. 366, 2008.
S. Tramontana, Bionaz, M., Sharma, A., Graugnard, D. E., Cutler, E. A., Ajmone-Marsan, P., Hurley, W. L., and Loor, J. J., “Internal controls for quantitative polymerase chain reaction of swine mammary glands during pregnancy and lactation.”, J Dairy Sci, vol. 91, no. 8, pp. 3057-66, 2008.
2009
L. K. Mathew, Sengupta, S., Franzosa, J. A., Perry, J., La Du, J., Andreasen, E. A., and Tanguay, R. L., “Comparative expression profiling reveals an essential role for raldh2 in epimorphic regeneration.”, J Biol Chem, vol. 284, no. 48, pp. 33642-53, 2009.
A. K. G. Kadegowda, Bionaz, M., Thering, B., Piperova, L. S., Erdman, R. A., and Loor, J. J., “Identification of internal control genes for quantitative polymerase chain reaction in mammary tissue of lactating cows receiving lipid supplements.”, J Dairy Sci, vol. 92, no. 5, pp. 2007-19, 2009.
2010
L. Resman, Howe, G., Jonsen, D., Englund, M., Druart, N., Schrader, J., Antti, H., Skinner, J., Sjödin, A., Chen, T. H. H., and Bhalerao, R. P., “Components acting downstream of short day perception regulate differential cessation of cambial activity and associated responses in early and late clones of hybrid poplar.”, Plant Physiol, vol. 154, no. 3, pp. 1294-303, 2010.
P. Piantoni, Bionaz, M., Graugnard, D. E., Daniels, K. M., Everts, R. E., Rodriguez-Zas, S. L., Lewin, H. A., Hurley, H. L., Akers, M., and Loor, J. J., “Functional and gene network analyses of transcriptional signatures characterizing pre-weaned bovine mammary parenchyma or fat pad uncovered novel inter-tissue signaling networks during development.”, BMC Genomics, vol. 11, p. 331, 2010.
E. Monaco, Bionaz, M., de Lima, A. Sobreira, Hurley, W. L., Loor, J. J., and Wheeler, M. B., “Selection and reliability of internal reference genes for quantitative PCR verification of transcriptomics during the differentiation process of porcine adult mesenchymal stem cells.”, Stem Cell Res Ther, vol. 1, no. 1, p. 7, 2010.
2011
V. V. Peremyslov, Mockler, T. C., Filichkin, S. A., Fox, S. E., Jaiswal, P., Makarova, K. S., Koonin, E. V., and Dolja, V. V., “Expression, splicing, and evolution of the myosin gene family in plants.”, Plant physiology, vol. 155, pp. 1191-204, 2011.
V. Shulaev, Sargent, D. J., Crowhurst, R. N., Mockler, T. C., Folkerts, O., Delcher, A. L., Jaiswal, P., Mockaitis, K., Liston, A., Mane, S. P., Burns, P., Davis, T. M., Slovin, J. P., Bassil, N., Hellens, R. P., Evans, C., Harkins, T., Kodira, C., Desany, B., Crasta, O. R., Jensen, R. V., Allan, A. C., Michael, T. P., Setubal, J. Carlos, Celton, J. - M., D Rees, J. G., Williams, K. P., Holt, S. H., Rojas, J. Jairo Ruiz, Chatterjee, M., Liu, B., Silva, H., Meisel, L., Adato, A., Filichkin, S. A., Troggio, M., Viola, R., Ashman, T. - L., Wang, H., Dharmawardhana, P., Elser, J., Raja, R., Priest, H. D., Bryant, D. W., Fox, S. E., Givan, S. A., Wilhelm, L. J., Naithani, S., Christoffels, A., Salama, D. Y., Carter, J., Girona, E. Lopez, Zdepski, A., Wang, W., Kerstetter, R. A., Schwab, W., Korban, S. S., Davik, J., Monfort, A., Denoyes-Rothan, B., Arus, P., Mittler, R., Flinn, B., Aharoni, A., Bennetzen, J. L., Salzberg, S. L., Dickerman, A. W., Velasco, R., Borodovsky, M., Veilleux, R. E., and Folta, K. M., “The genome of woodland strawberry(Fragaria vesca).”, Nature genetics, vol. 43, pp. 109-16, 2011.
2012
S. Lal, La Du, J., Tanguay, R. L., and Greenwood, J. A., “Calpain 2 is required for the invasion of glioblastoma cells in the zebrafish brain microenvironment.”, J Neurosci Res, vol. 90, no. 4, pp. 769-81, 2012.
J. Chen, Huang, C., Truong, L., La Du, J., Tilton, S. C., Waters, K. M., Lin, K., Tanguay, R. L., and Dong, Q., “Early life stage trimethyltin exposure induces ADP-ribosylation factor expression and perturbs the vascular system in zebrafish.”, Toxicology, vol. 302, no. 2-3, pp. 129-39, 2012.
S. Xu, Liu, H., Fan, Y., Schaller, R., Jiao, J., and Chaplen, F., “Enhanced performance and mechanism study of microbial electrolysis cells using Fe nanoparticle-decorated anodes.”, Appl Microbiol Biotechnol, vol. 93, no. 2, pp. 871-80, 2012.
M. Bionaz, Thering, B. J., and Loor, J. J., “Fine metabolic regulation in ruminants via nutrient-gene interactions: saturated long-chain fatty acids increase expression of genes involved in lipid metabolism and immune response partly through PPAR-α activation.”, Br J Nutr, vol. 107, no. 2, pp. 179-91, 2012.
T. L. Tal, Franzosa, J. A., Tilton, S. C., Philbrick, K. A., Iwaniec, U. T., Turner, R. T., Waters, K. M., and Tanguay, R. L., “MicroRNAs control neurobehavioral development and function in zebrafish.”, FASEB J, vol. 26, no. 4, pp. 1452-61, 2012.
M. Bionaz, Periasamy, K., Rodriguez-Zas, S. L., Hurley, W. L., and Loor, J. J., “A novel dynamic impact approach (DIA) for functional analysis of time-course omics studies: validation using the bovine mammary transcriptome.”, PLoS One, vol. 7, no. 3, p. e32455, 2012.
M. Bionaz, Periasamy, K., Rodriguez-Zas, S. L., Everts, R. E., Lewin, H. A., Hurley, W. L., and Loor, J. J., “Old and new stories: revelations from functional analysis of the bovine mammary transcriptome during the lactation cycle.”, PLoS One, vol. 7, no. 3, p. e33268, 2012.
E. Monaco, Bionaz, M., Rodriguez-Zas, S., Hurley, W. L., and Wheeler, M. B., “Transcriptomics comparison between porcine adipose and bone marrow mesenchymal stem cells during in vitro osteogenic and adipogenic differentiation.”, PLoS One, vol. 7, no. 3, p. e32481, 2012.
E. Ho, Dukovcic, S., Hobson, B., Wong, C. P., Miller, G., Hardin, K., Traber, M. G., and Tanguay, R. L., “Zinc transporter expression in zebrafish (Danio rerio) during development.”, Comp Biochem Physiol C Toxicol Pharmacol, vol. 155, no. 1, pp. 26-32, 2012.